Publications
Publications of 2016
The works of 2016 by the lab's members during their time here, from their ORCID records, Crossref and Europe PMC.
43 publicationsLater: 2017Earlier: 2015All publications
201643 publications
Topic: Mechanistic modelling Large-scale modeling of cancer signaling: Mechanistic modeling meets Big Data
Identification of predictive response and resistance factors to targeted therapy in gastric cancer using a systems medicine approach
Inferring catalysis in biological systems
Peptide serum markers in islet autoantibody-positive children
Analysis of Cell Lineage Trees by Exact Bayesian Inference Identifies Negative Autoregulation of Nanog in Mouse Embryonic Stem Cells
A computational model to predict severity of atopic eczema from 30 serum proteins
A novel molecular disease classifier for psoriasis and eczema
Dynamic landscape of pancreatic carcinogenesis reveals early molecular networks of malignancy
TALEN/CRISPR-mediated engineering of a promoterless anti-viral RNAi hairpin into an endogenous miRNA locus
340 Interface dermatitis shows a distinctive molecular signature independent from individual disease background
LSC Abstract – Systemic and local metabolomics profiling reveals novel insights into the progression of emphysema
LSC Abstract – Systemic and local metabolomics profiling reveals novel insights into the progression of emphysema
LSC Abstract – Early biomarkers indicating the development of neonatal chronic lung disease defined by clinical and imaging parameters
Diffusion pseudotime robustly reconstructs lineage branching
Tailored parameter optimization methods for ordinary differential equation models with steady-state constraints
IRdisplay: 'Jupyter' Display Machinery
Inference for Stochastic Chemical Kinetics Using Moment Equations and System Size Expansion
Lactation is associated with altered metabolomic signatures in women with gestational diabetes
Abstract 1945: Identification of a miRNA/mRNA network driving non-small cell lung cancer (NSCLC) dissemination
Clinical impact of GATA2 mutations in acute myeloid leukemia patients harboring CEBPA mutations: a study of the AML study group
Interleukin-4 and interferon-γ orchestrate an epithelial polarization in the airways
Early myeloid lineage choice is not initiated by random PU.1 to GATA1 protein ratios
Software tools for single-cell tracking and quantification of cellular and molecular properties
Computational approaches for systems metabolomics
Editorial overview: Systems biology-the intersection of experiments and computation, underpinning biotechnology
repr: Serializable Representations
A novel molecular disease classifier for eczema and psoriasis
MEMO: multi-experiment mixture model analysis of censored data
Unbiased Prediction and Feature Selection in High-Dimensional Survival Regression
miTALOS v2: Analyzing Tissue Specific microRNA Function
Epigenetic germline inheritance of diet-induced obesity and insulin resistance
Metabolomics reveals effects of maternal smoking on endogenous metabolites from lipid metabolism in cord blood of newborns
Pitchfork and Gprasp2 Target Smoothened to the Primary Cilium for Hedgehog Pathway Activation
Abstract P1-06-02: A force-sensitive organoid assay to quantify regenerative potential of single primary human mammary cells
MicroRNA-138 promotes acquired alkylator resistance in glioblastoma by targeting the Bcl-2-interacting mediator BIM
The global gene expression profile of the secondary transition during pancreatic development
CERENA: ChEmical REaction Network Analyzer—A Toolbox for the Simulation and Analysis of Stochastic Chemical Kinetics
Metabolomics screening identifies reduced L-carnitine to be associated with progressive emphysema
Label-free cell cycle analysis for high-throughput imaging flow cytometry
Combinatorial Histone Acetylation Patterns Are Generated by Motif-Specific Reactions
Mitosis Detection in Intestinal Crypt Images with Hough Forest and Conditional Random Fields
Quantitative comparison of competing PDE models for Pomlp dynamics in fission yeast * *The authors acknowledge financial support from the Postdoctoral Fellowship Program (PFP) of the Helmholtz Zentrum Munchen.