Plate IV.254 · Publications

The discovAIR project: a roadmap towards the Human Lung Cell Atlas

Review in European Respiratory Journal, 27 January 2022.

ReviewOpen accessResearch area: Cell Atlas, Integration

Authors

  1. Malte D. Luecken
  2. Laure-Emmanuelle Zaragosi
  3. Elo Madissoon
  4. Lisa Sikkema
  5. Alexandra B. Firsova
  6. Elena De Domenico
  7. Louis Kümmerle
  8. Adem Saglam
  9. Marijn Berg
  10. Aurore C.A. Gay
  11. Janine Schniering
  12. Christoph H. Mayr
  13. Xesús M. Abalo
  14. Ludvig Larsson
  15. Alexandros Sountoulidis
  16. Sarah A. Teichmann
  17. Karen van Eunen
  18. Gerard H. Koppelman
  19. Kourosh Saeb-Parsy
  20. Sylvie Leroy
  21. Pippa Powell
  22. Ugis Sarkans
  23. Wim Timens
  24. Joakim Lundeberg
  25. Maarten van den Berge
  26. Mats Nilsson
  27. Peter Horváth
  28. Jessica Denning
  29. Irene Papatheodorou
  30. Joachim L. Schultze
  31. Herbert B. Schiller
  32. Pascal Barbry
  33. Ilya Petoukhov
  34. Alexander V. Misharin
  35. Ian M. Adcock
  36. Michael von Papen
  37. Fabian J. Theis
  38. Christos Samakovlis
  39. Kerstin B. Meyer
  40. Martijn C. Nawijn

Abstract

The Human Cell Atlas (HCA) consortium aims to establish an atlas of all organs in the healthy human body at single-cell resolution to increase our understanding of basic biological processes that govern development, physiology and anatomy, and to accelerate diagnosis and treatment of disease. The Lung Biological Network of the HCA aims to generate the Human Lung Cell Atlas as a reference for the cellular repertoire, molecular cell states and phenotypes, and cell-cell interactions that characterise normal lung homeostasis in healthy lung tissue. Such a reference atlas of the healthy human lung will facilitate mapping the changes in the cellular landscape in disease. The discovAIR project is one of six pilot actions for the HCA funded by the European Commission in the context of the H2020 framework programme. discovAIR aims to establish the first draft of an integrated Human Lung Cell Atlas, combining single-cell transcriptional and epigenetic profiling with spatially resolving techniques on matched tissue samples, as well as including a number of chronic and infectious diseases of the lung. The integrated Human Lung Cell Atlas will be available as a resource for the wider respiratory community, including basic and translational scientists, clinical medicine, and the private sector, as well as for patients with lung disease and the interested lay public. We anticipate that the Human Lung Cell Atlas will be the founding stone for a more detailed understanding of the pathogenesis of lung diseases, guiding the design of novel diagnostics and preventive or curative interventions.

Cite

@article{luecken2022discovair,
  title = {{The discovAIR project: a roadmap towards the Human Lung Cell Atlas}},
  author = {Luecken, Malte D. and Zaragosi, Laure-Emmanuelle and Madissoon, Elo and Sikkema, Lisa and Firsova, Alexandra B. and De Domenico, Elena and Kümmerle, Louis and Saglam, Adem and Berg, Marijn and Gay, Aurore C.A. and Schniering, Janine and Mayr, Christoph H. and Abalo, Xesús M. and Larsson, Ludvig and Sountoulidis, Alexandros and Teichmann, Sarah A. and van Eunen, Karen and Koppelman, Gerard H. and Saeb-Parsy, Kourosh and Leroy, Sylvie and Powell, Pippa and Sarkans, Ugis and Timens, Wim and Lundeberg, Joakim and van den Berge, Maarten and Nilsson, Mats and Horváth, Peter and Denning, Jessica and Papatheodorou, Irene and Schultze, Joachim L. and Schiller, Herbert B. and Barbry, Pascal and Petoukhov, Ilya and Misharin, Alexander V. and Adcock, Ian M. and von Papen, Michael and Theis, Fabian J. and Samakovlis, Christos and Meyer, Kerstin B. and Nawijn, Martijn C.},
  journal = {European Respiratory Journal},
  publisher = {European Respiratory Society (ERS)},
  year = {2022},
  month = jan,
  doi = {10.1183/13993003.02057-2021},
  url = {https://doi.org/10.1183/13993003.02057-2021},
  pmid = {35086829},
  pmcid = {PMC9386332}
}
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